CDS

Accession Number TCMCG027C40107
gbkey CDS
Protein Id XP_018824588.2
Location join(10338395..10338823,10339163..10339240,10339359..10339439,10340705..10340859,10340949..10342072,10346459..10346559)
Gene LOC108993971
GeneID 108993971
Organism Juglans regia

Protein

Length 655aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA350852
db_source XM_018969043.2
Definition protein GAMETOPHYTE DEFECTIVE 1 isoform X1 [Juglans regia]

EGGNOG-MAPPER Annotation

COG_category J
Description RNase P subunit p30
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K03539        [VIEW IN KEGG]
EC 3.1.26.5        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03008        [VIEW IN KEGG]
ko03013        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0000172        [VIEW IN EMBL-EBI]
GO:0000966        [VIEW IN EMBL-EBI]
GO:0001682        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005655        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005732        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0030677        [VIEW IN EMBL-EBI]
GO:0030681        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034471        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099116        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902555        [VIEW IN EMBL-EBI]
GO:1905348        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTTTCTTCGACCTGAATATACCGTACCTCGAAGCCTCCCCGTCGACCGATAAGACGCCGTTCAAAGCCGCGCGCACGAAGCTCGTGATAAAGGCCATGGAGCTAGGCTACACCGGCATCGCCTACAACAATACGATCAAGGGCGTCATGTCCGACCACGACCGTTGCGCCGTCTCTCTCCTCACTCTCTCCTCTCTCCTCAAGCTCGTGCCCTCCCTCGCCTCCTCCGTCAATCTCCATCGCGATCTCCTCGGCATCCCACGCGCATCCCCCTTTCGCCAATATACGCGCCTTACTGTGTGCGTAGAAAGCCCCCCTCAGGCCCAGGCCCTCAACTCGGGTAACCCTATCTTAAAGACTTACGACTTGGTCGCTGTGAGGCCCTTGAACCAGGTCGTCTTCGACCAGGCCTGTGAGAAATCGGAGGTAGATATAATAGCAATTGATTTCTCAGAGAAGCTTCCTTTCCGATTGAAGCTGCCTATGGTTAAAGCCGCCATTGAGCGTGGAGTTTATTTTGAGATCACGTATTCCAATCTTATTGCGGATGTCCAATCAAGGAGGCAAATGATATCCAATGCAAAGTTACTGGTGGACTGGACTCGAGGAAAAAATCTCATTTTCTCAAGTGCTGCCCCTTCTGTGAATGAACTTAGAGGGCCATATGATGTTGCAAACTTATCGTCATTGCTTGGGCTCTCTATGGAACGAGCTAAAGCAGCTATTTCCAAAAATTGTAGGACTCTCATAGCTAATGCTTTAAGGAGAAAACATTTTTACAAGGACGCAATCAGAGTTGAAGTACTATCATCAGATGGACAATTAGACTGCAACAAACCTTTGTCTGGTGATTGGTTTAAATGGGATCCCATCTCTAGTGGTGAAGGTGATTTGCTATTAGAGAACATGGCAAAGTCTTTTCCTGCCTCCAATAAAGTATCAAAAACTGTGAAAGCCATTGATTTTGCTTCGATTATTAATGGCATGACATCTCATGGCTTTCAAGTCAACGCTTTGACATCTCAAACTGAGGGTGTGCCCCAACCACCAGATAATGGAAATAACATTTTGCCTGCTGCTGGACTAGTTGAGGTAGCTGCCGCAGCCAGTGGACAGATTGAACAGCTTGATAGACTTGATCTTTTAACAGAACCAGATCCAACTTCATCATATGATTCTCCATTAATACATCAAACCCCTGTCTGTGAAGATTCTCAAAATTTATTTTCACCCAATGATACTTCAACAGGTCTCACTAACTCTGAGGAAATCAGAATTCCTACAACCGCCTCCAAAGAAGAAAAAGAGAATCTAAATGGTTCAGATGTGAATCTTTCTTTGAATGTAGTGGAAAAATATGATTTTCAACTACAAAAATCTTTCTCTAGCTGTGAATCTCATATTGTTCCACCAAATGAAAATGTAATATTTCATGCATTGAGTAGGGACTTGGAGTTAGCTGCTCCTTGTGATGCCGGTGCTAAAGTAGAGCTTGCGACAGTGTTTGAGGATATTGTTCTTCCTGCTTCTAAAAATGAAGAGTCTCAAAGTACAAAAAACTCTGATGGAGTCTTGGATTTTGTAATGGATGGAGAGAGAATGGAGGTGGACATGAAAAATAAAGAAAGAACACCTTTGGACCCAAATGATGGGTCTTTTATGGAGACAAAACAATTTATAGAACCCATGAATGGTGCGGGTGCACTCACTGATTGCCTTCCAATTTCAGATTCTTATCCGGAGATGACAATTATAGGTGATTCTTCTATTGCAAAGCATGAGTCAACAGAGGTGACAATGGAAGAGAAAAGGCATGGAGAATCTGATACTGAAGCTAATCAAACCTTGGTTCAATCTATATCAGGCAGATCAAGACCAAGATCGAGGACTTCTCATGGAGCAATGTTATTTCCTTTGAATCGTTTGTTGATTACTACAGCTTTCAAGAGGAAACCAAGAAGATGA
Protein:  
MGFFDLNIPYLEASPSTDKTPFKAARTKLVIKAMELGYTGIAYNNTIKGVMSDHDRCAVSLLTLSSLLKLVPSLASSVNLHRDLLGIPRASPFRQYTRLTVCVESPPQAQALNSGNPILKTYDLVAVRPLNQVVFDQACEKSEVDIIAIDFSEKLPFRLKLPMVKAAIERGVYFEITYSNLIADVQSRRQMISNAKLLVDWTRGKNLIFSSAAPSVNELRGPYDVANLSSLLGLSMERAKAAISKNCRTLIANALRRKHFYKDAIRVEVLSSDGQLDCNKPLSGDWFKWDPISSGEGDLLLENMAKSFPASNKVSKTVKAIDFASIINGMTSHGFQVNALTSQTEGVPQPPDNGNNILPAAGLVEVAAAASGQIEQLDRLDLLTEPDPTSSYDSPLIHQTPVCEDSQNLFSPNDTSTGLTNSEEIRIPTTASKEEKENLNGSDVNLSLNVVEKYDFQLQKSFSSCESHIVPPNENVIFHALSRDLELAAPCDAGAKVELATVFEDIVLPASKNEESQSTKNSDGVLDFVMDGERMEVDMKNKERTPLDPNDGSFMETKQFIEPMNGAGALTDCLPISDSYPEMTIIGDSSIAKHESTEVTMEEKRHGESDTEANQTLVQSISGRSRPRSRTSHGAMLFPLNRLLITTAFKRKPRR